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Génétique Quantitative et Évolution - Le Moulon



Ingénieur d'Études, INRAE

Looking for tools that can help scientists at GQE to analyze their data

  • NGS analysis,
  • Galaxy


01 69 33 23 76


  • Génétique Quantitative et Évolution - Le Moulon
  • Université Paris-Saclay, INRAE, CNRS, AgroParisTech
  • Ferme du Moulon
  • F-91190 Gif-sur-Yvette
    Équipes :
  • ABI

Education and positions

  • Since 2005 - Software development engineer in bioinformatics/Ingénieur d’études (INRA) at UMR GQE - Le Moulon, Gif-sur-Yvette, France,
  • 2004-2005 (9 months) – Bioinformatics Engineer at Institut Pasteur in Proteomics Platform, Paris, France,
  • 2004 Master degree in bioinformatics / DESS EGOISt, Rouen, France.

Work of interest

  • NGS analysis (sequences comparisons, SNP mapping/filtering), or for Genome wide association studies, or others according to user needs,
  • Tools installation and tools integration in Galaxy to make them available to users.


  • Software development in Perl language,
  • Software development in Python language (learning in progress),
  • Linux environment.

Current projects

  • Responsible of Galaxy, a Bioinformatics software environment for data analysis installed locally at QGE and of analysis tools deployment in Galaxy,
  • Tools installation and development linked to software deployment in Galaxy software, in response to UMR scientific needs.

Main previous project

  • Database designer and web interface developer for the “French cultivated Wheat”, in collaboration with DEAP QGE-Le Moulon team,
  • Bioanalysis of Yeast NGS data for adaptative diversity of S. cerevisiae in collaboration with D. Sicard.


Urien C, Legrand J, Montalent P, Casaregola S, Sicard D. (2019) Fungal Species Diversity in French Bread Sourdoughs Made of Organic Wheat Flour. Front. Microbiol., (10) 201
Ganal MW, Durstewitz G, Polley A, Bérard A, Buckler ES, Charcosset A, Clarke JD, Graner EM, Hansen M, Joets J, Le Paslier MC, McMullen MD, Montalent P, Rose M, Schön CC, Sun Q, Walter H, Martin OC, Falque M, Lukens L. (2011) A Large Maize (Zea mays L.) SNP Genotyping Array: Development and Germplasm Genotyping, and Genetic Mapping to Compare with the B73 Reference Genome. PLoS ONE, 12 (6) e28334
Wang S, Spor A, Nidelet T, Montalent P, Dillmann C, de Vienne D, Sicard D. (2011) Switch between life history strategies due to changes in glycolytic enzyme gene dosage in Saccharomyces cerevisiae. Applied and environmental microbiology, 2 (77) 452-9