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Génétique Quantitative et Évolution - Le Moulon

ABI - Bioinformatics and Informatics

The activities of ABI are:

  • the analysis of genomes sequencing data,
  • the development of software and databases for genetics,
  • IT: systems administration and network.
ABI team members

ABI team members

The team Bioinformatics and Informatics includes 3 groups:


ABI is attached to the LabEx BASC, Biodiversité, Agroécosystèmes, Société, Climat.

Publications

  • Damerval C., Citerne H., Conde E Silva N., Deveaux Y., Delannoy E., Joets J. , Simonnet F., Staedler Y., Schönenberger J., Yansouni J., Le Guilloux M., Sauquet H., Nadot S.. (2019) Unraveling the Developmental and Genetic Mechanisms Underpinning Floral Architecture in Proteaceae. Front Plant Sci, (10) 18
  • Mabire C., Duarte J., Darracq A., Pirani A., Rimbert H., Madur D., Combes V., Vitte C., Praud S., Rivière N., Joets J. , Pichon JP., Nicolas SD.. (2019) High throughput genotyping of structural variations in a complex plant genome using an original Affymetrix® axiom® array. BMC Genomics, 1 (20) 848
  • Richard MMS., Gratias A., Thareau V., Kim KD., Balzergue S., Joets J. , Jackson SA., Geffroy V.. (2018) Genomic and epigenomic immunity in common bean: the unusual features of NB-LRR gene family. DNA Res, 2 (25) 161-172
  • Ganal MW., Durstewitz G., Polley A., Bérard A., Buckler ES., Charcosset A., Clarke JD., Graner EM., Hansen M., Joets J. , Le Paslier MC., McMullen MD., Montalent P. , Rose M., Schön CC., Sun Q., Walter H., Martin OC., Falque M., Lukens L.. (2011) A Large Maize (Zea mays L.) SNP Genotyping Array: Development and Germplasm Genotyping, and Genetic Mapping to Compare with the B73 Reference Genome. PLoS ONE, 12 (6) e28334
  • Wang S., Spor A., Nidelet T., Montalent P. , Dillmann C., de Vienne D., Sicard D.. (2011) Switch between life history strategies due to changes in glycolytic enzyme gene dosage in Saccharomyces cerevisiae. Applied and environmental microbiology, 2 (77) 452-9